API reference
- tfcomb.objects module
- tfcomb.network module
- tfcomb.analysis module
- tfcomb.annotation module
- tfcomb.plotting module
- tfcomb.utils module
OneTFBS
TFBSPair
TFBSPairList
InputError
StopExecution
check_graphtool()
check_module()
check_columns()
check_dir()
check_writeability()
check_type()
check_string()
check_value()
random_string()
Progress
log_progress()
prepare_motifs()
open_genome()
open_bigwig()
check_boundaries()
unique_region_names()
calculate_TFBS()
resolve_overlaps()
add_region_overlap()
shuffle_array()
shuffle_sites()
calculate_background()
get_threshold()
is_symmetric()
make_symmetric()
set_contrast()
analyze_signal_chunks()
evaluate_noise_chunks()
getAllAttr()